Mathis Lab publishes a new AI tool to track animals
September 17, 2018
Quantifying behavior is crucial for many applications in neuroscience. Videography provides easy methods for the observation and recording of animal behavior in diverse settings, yet extracting particular aspects of a behavior for further analysis can be highly time consuming. In motor control studies, humans or other animals are often marked with reflective markers to assist with computer-based tracking, but markers are intrusive, and the number and location of the markers must be determined a priori. Here we present an efficient method for markerless pose estimation based on transfer learning with deep neural networks that achieves excellent results with minimal training data. We demonstrate the versatility of this framework by tracking various body parts in multiple species across a broad collection of behaviors. Remarkably, even when only a small number of frames are labeled (~200), the algorithm achieves excellent tracking performance on test frames that is comparable to human accuracy.
Rowland Fellow Bryan Hunter, along with his Ph.D. advisor Harry B. Gray of Caltech, has received the 2019 Nobel Laureate Signature Award for Graduate Education in Chemistry for his doctoral thesis. https://cen.acs.org/acs-news/programs/ACS-2019-national-award-winners/96/i37
The award will be presented on April 2, 2019 at the ACS National Meeting in...
The Rowland Foundation has awarded the Rowland Institute at Harvard $100,000 for one year to continue the program that provides mentoring and supervisory experience for a postdoctoral fellow and hands-on research experience for an undergraduate research student working with postdoctoral fellow.
The project will focus on characterizing and comparing motility behavior in liquids and model complex environments in two well-known pathogens - Vbrio cholerae and Pseudomonas aeruginosa whose swimming motility has barely been studied despite long-recognized...